PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_30666

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

CAMTA

Protein Properties

Length: 181aa MW: 20763.5 Da PI: 4.2533

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_30666	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	34.8	3e-11	117	151	75	109
CG-1 75 vggvevlycyYahseenptfqrrcywlLeeeleki 109 +g+ e +++yYa++e++p+f rrcywlL++ +++ PEQU_30666 117 IGNEERIHVYYARGEDDPNFYRRCYWLLDKWKKRL 151 7899*************************986655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51437	11.092	113	176	IPR005559	CG-1 DNA-binding domain
Pfam	PF03859	2.5E-7	117	147	IPR005559	CG-1 DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence Send to blast
MISFTDYEAC EKLNSDPRED DFIYDYQLFA DDIEIIIILD DPTRKNPTGL AEATLEDSDS 60 EVMGFQVEIE LIGAFNIFST IKRDLTTAGP PPESILLPQR LYPMDWVVLR FYLSSEIGNE 120 ERIHVYYARG EDDPNFYRRC YWLLDKWKKR LTTTSSIEKA CSVLLAAGDV GEVRAKCVKG 180 P

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	3e-13	calmodulin binding;transcription regulators