PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_30690

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 114aa MW: 13297.8 Da PI: 11.6363

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_30690	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87	1.9e-27	19	68	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrW+p+L ++Fv+a+e+LGG +kAtPk +l++m+vkgLt++hvkSHLQ PEQU_30690 19 PRLRWNPDLQHCFVHAIERLGGLHKATPKLVLQMMDVKGLTISHVKSHLQ 68 8************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.7E-25	15	68	IPR009057	Homeodomain-like
PROSITE profile	PS51294	9.489	15	75	IPR017930	Myb domain
SuperFamily	SSF46689	1.0E-11	18	71	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.3E-21	19	71	IPR006447	Myb domain, plants
Pfam	PF00249	3.2E-6	20	70	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 114 aa Download sequence Send to blast
MASRGRNGAV RQYNRSKIPR LRWNPDLQHC FVHAIERLGG LHKATPKLVL QMMDVKGLTI 60 SHVKSHLQVL FGLNIHALKL LFFSEKNIFF FIMQMYRSKT NDISRQGRLK CIVH

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	6e-16	20	68	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	6e-16	20	68	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	6e-16	20	68	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	6e-16	20	68	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	6e-16	20	68	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	6e-16	20	68	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	6e-16	20	68	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	6e-16	20	68	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	6e-16	20	68	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	6e-16	20	68	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	6e-16	20	68	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	6e-16	20	68	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020593284.1	3e-47	probable transcription factor KAN2
Swissprot	Q700D9	4e-25	MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBL	A0A3Q0IGJ6	6e-35	A0A3Q0IGJ6_PHODC; uncharacterized protein LOC103718164 isoform X2
STRING	XP_008804408.1	7e-35	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7610	29	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	6e-31	G2-like family protein