PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_30892
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family DBB
Protein Properties Length: 210aa    MW: 23352.5 Da    PI: 7.1092
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_30892genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.93.6e-07434535
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHk 35
                +C+ +e+  + lfC  ++  lC+ C ++ Hk
  PEQU_30892  4 ICDVCESAAAVLFCAADEAALCRPCDDKVHK 34
                8***************************995 PP
2zf-B_box22.42.6e-075286236
    zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36
                e ++C+ +e  ++ ++Ce +++ lC +C +  H g
  PEQU_30892 52 EVPRCDICEVSPAFFYCEIDGSSLCLQCDTIVHVG 86
                789******999*****************999955 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.054147IPR000315B-box-type zinc finger
CDDcd000213.57E-6345No hitNo description
PfamPF006439.5E-6443IPR000315B-box-type zinc finger
SMARTSM003364.8E-7447IPR000315B-box-type zinc finger
PROSITE profilePS501198.9585196IPR000315B-box-type zinc finger
SMARTSM003365.0E-105196IPR000315B-box-type zinc finger
PfamPF006439.2E-65285IPR000315B-box-type zinc finger
CDDcd000212.63E-45484No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010100Biological Processnegative regulation of photomorphogenesis
GO:0070370Biological Processcellular heat acclimation
GO:0071483Biological Processcellular response to blue light
GO:0005634Cellular Componentnucleus
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MRIICDVCES AAAVLFCAAD EAALCRPCDD KVHKCNKLAS RHVRVGLADP SEVPRCDICE  60
VSPAFFYCEI DGSSLCLQCD TIVHVGGKRT HARYLLLRQR VEFVANKHGQ VEDGSLQKFF  120
QHANHVDYDH SSHPMGREKQ PNHEVSPPAI LANSDHHGNT DSKMIDLNKT PSRTRGQVSN  180
MQVPFPSCNL SFHKAVKEIF LTTCDCSGYI
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020571651.11e-134B-box zinc finger protein 18-like isoform X1
SwissprotC0SVM52e-63BBX19_ARATH; B-box zinc finger protein 19
TrEMBLA0A2I0X6I31e-111A0A2I0X6I3_9ASPA; Putative salt tolerance-like protein
STRINGXP_008785801.11e-88(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103342225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.17e-66DBB family protein