PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_30954

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 228aa MW: 25472.7 Da PI: 9.0405

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_30954	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	23	77	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk + ++m+v+gLt++hvkSHLQkYRl PEQU_30954 23 RQRLRWTNELHERFVDAVTQLGGPDRATPKGVQRVMGVQGLTIYHVKSHLQKYRL 77 58****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.779	20	80	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	6.0E-32	22	78	IPR009057	Homeodomain-like
SuperFamily	SSF46689	9.14E-18	22	77	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.4E-26	24	78	IPR006447	Myb domain, plants
Pfam	PF00249	3.8E-9	25	76	IPR001005	SANT/Myb domain
Pfam	PF14379	2.6E-23	108	154	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence Send to blast
MNISAMAPHA GGNNQNNPGA ASRQRLRWTN ELHERFVDAV TQLGGPDRAT PKGVQRVMGV 60 QGLTIYHVKS HLQKYRLAKC LPDSSAEVTR ELKESDDVLS KLDNSSGIQI SEALKLQMEV 120 QKRLHEQLEV QRQLQLRIEA QGKYLKKIIE EQQRLNGGGF MPISMDQSSE DKTDPSTPTP 180 IAKSSLHAKS NTNLLNSLSF EDSHHEPHTP ETGSPLMSLK HERQVKSQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-21	23	79	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-21	23	79	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-21	23	79	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-21	23	79	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-21	23	79	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-21	23	79	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-21	23	79	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-21	23	79	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-21	23	79	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-21	23	79	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-21	23	79	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-21	23	79	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020593060.1	1e-169	myb family transcription factor PHL7-like
Swissprot	Q9SJW0	5e-85	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2I0VKQ4	1e-125	A0A2I0VKQ4_9ASPA; Protein PHR1-LIKE 1
STRING	XP_008782978.1	4e-97	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2220	38	96

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	3e-70	G2-like family protein