PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31437
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 170aa    MW: 19724.8 Da    PI: 6.2988
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31437genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.22.5e-212183359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSS...TTEEEEEEES--SS- CS
        WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaed...pkvveitYegeHnhe 59
                Dg++WrKYGqK +++s fprsYY+Ct++   gC+++k ++r++++   p  +++ Y+ +H+++
  PEQU_31437 21 DGHQWRKYGQKRIHSSVFPRSYYKCTHNkdqGCQATKTIQRKEDNnsnPPQFVVSYSMHHTCK 83
                9**************************99999*********876411156899*******996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.0E-22783IPR003657WRKY domain
SuperFamilySSF1182902.75E-201383IPR003657WRKY domain
SMARTSM007749.9E-271984IPR003657WRKY domain
PfamPF031062.3E-222183IPR003657WRKY domain
PROSITE profilePS5081117.1672185IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
KNRNKGRMES WRIVTSVPHF DGHQWRKYGQ KRIHSSVFPR SYYKCTHNKD QGCQATKTIQ  60
RKEDNNSNPP QFVVSYSMHH TCKAKETQEI PFVMDSLANT NEHSTYISQA ASPDHSLALD  120
LQVEDFEPES LMDSMLSPPN ELNGETNWFD GDSMMSPLPA FEFDWNYQMS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A7e-1421831069OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020597669.11e-128probable WRKY transcription factor 70
TrEMBLA0A2I0WQZ75e-68A0A2I0WQZ7_9ASPA; Putative WRKY transcription factor 70
STRINGXP_008788524.13e-35(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.16e-19WRKY DNA-binding protein 38