PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31485
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 131aa    MW: 14662 Da    PI: 10.0571
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31485genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.32.4e-1214633687
                EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87
                + ++d +g+ W+vk+  +  +g+  +++GW +Fv+++ + +g+fv+F+++g 
  PEQU_31485 14 VFIKDIDGKIWTVKI--SIVDGSLAFQNGWHDFVSDHSITVGEFVLFTYTGG 63
                7789***********..8889999************************9874 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.998174IPR003340B3 DNA binding domain
SuperFamilySSF1019361.26E-141274IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.104.7E-131273IPR015300DNA-binding pseudobarrel domain
CDDcd100177.34E-111471No hitNo description
PfamPF023622.1E-91463IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MAACILKGLA KNYVFIKDID GKIWTVKISI VDGSLAFQNG WHDFVSDHSI TVGEFVLFTY  60
TGGLLFTARI FGTSSLERVN FQMKRRKGKC AKERCASDLK LVNITIPERQ KKVSQSSEEK  120
HSPSGTEALK F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590307.16e-93B3 domain-containing protein Os02g0598200-like
TrEMBLA0A2I0X2J54e-52A0A2I0X2J5_9ASPA; B3 domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122722730
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-10B3 family protein