PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_31486

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Protein Properties

Length: 65aa MW: 7519.78 Da PI: 7.9254

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_31486	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.8	2.4e-10	3	54	45	98
EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 45 sWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 W v + k+ + + + +GW +F+kan+++ gD++ F+l+++ e +++v++ + PEQU_31486 3 CWPVLY--HKSNSFVGFLGGWVDFAKANNICRGDICEFELINKLEYKFRVQIMK 54 599999..88888888889*********************99877778888876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50863	11.406	1	56	IPR003340	B3 DNA binding domain
SuperFamily	SSF101936	2.55E-12	2	54	IPR015300	DNA-binding pseudobarrel domain
Gene3D	G3DSA:2.40.330.10	4.1E-11	2	57	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	2.63E-8	2	52	No hit	No description
Pfam	PF02362	1.4E-7	3	54	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 65 aa Download sequence Send to blast
MRCWPVLYHK SNSFVGFLGG WVDFAKANNI CRGDICEFEL INKLEYKFRV QIMKAEGSIC 60 DEKVA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020590305.1	2e-42	B3 domain-containing protein Os01g0905400-like
Refseq	XP_020590306.1	2e-42	B3 domain-containing protein Os01g0905400-like
TrEMBL	A0A2I0X2J5	1e-26	A0A2I0X2J5_9ASPA; B3 domain-containing protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11461	32	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18090.1	2e-07	B3 family protein