PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31816
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 210aa    MW: 24084 Da    PI: 6.0389
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31816genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.12.6e-103341245
                     HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     l +a+k+lG+  W+ Ia++++ gR+++ +k++w+
       PEQU_31816  3 LNEAHKELGNS-WAEIAKKIP-GRSENFIKNHWN 34
                     669******99.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.303141IPR017930Myb domain
CDDcd001673.29E-6137No hitNo description
SuperFamilySSF466893.18E-8242IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-11235IPR009057Homeodomain-like
PfamPF002498.6E-9234IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
NLLNEAHKEL GNSWAEIAKK IPGRSENFIK NHWNATKRKL SSKGKSRIRK TTKGKTFLLQ  60
EYIVKTTEFL NNSTTTKEQI LTTTKAETSD LNFINGGDYF NESLEETFDF MAASPPQFHE  120
IFGKEVNESS SNGGNQDFYS DLYLSYLMDG LLVTSEFVEF HGERLEDLIE HMVDLGCKKD  180
MDLIKMISLC SSQGCSSNYT RRRSYDYNFT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020588892.11e-153LOW QUALITY PROTEIN: myb protein-like
TrEMBLA0A2I0W9L31e-71A0A2I0W9L3_9ASPA; Transcription factor MYB98
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2549955
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.15e-18myb domain protein 119