PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31825
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 232aa    MW: 25832.7 Da    PI: 9.4387
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31825genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000123454323
                ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                C+ C +sFs+   L  H+r H
  PEQU_31825 34 CTECEMSFSSTKALFGHLRIH 54
                66777**************99 PP
2zf-C2H214.97.7e-05178200123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C +C+ksFs+   L  H r H
  PEQU_31825 178 HQCDKCDKSFSSGQALGGHKRAH 200
                 79************999999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.223254IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.8683259IPR007087Zinc finger, C2H2
PROSITE patternPS0002803454IPR007087Zinc finger, C2H2
SuperFamilySSF576677.44E-93454No hitNo description
PfamPF139123.6E-53456IPR007087Zinc finger, C2H2
SuperFamilySSF576677.44E-9173200No hitNo description
SMARTSM003550.054178200IPR015880Zinc finger, C2H2-like
PfamPF139121.7E-11178201IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.602.7E-4178200IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.51178205IPR007087Zinc finger, C2H2
PROSITE patternPS000280180200IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MLESVEKKDI SLKIRTKLHR SEKNASSSLS CNDCTECEMS FSSTKALFGH LRIHRKSNRG  60
VGKHSLLRLG QAKKGEDVLA ACNLLEMRQL KSETAINDAK LGQLRWVCAK IERERRKKMK  120
ETVSKHSDNN LDITCRMVSL TPSMLALHEH SVDQRMTSNS NEGVKIMAEV GAMEVEMHQC  180
DKCDKSFSSG QALGGHKRAH YTGPPLCRPG RDGSLSAVAV AERVLVHHID LN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596978.11e-171zinc finger protein ZAT1-like
TrEMBLA0A2I0XAR76e-66A0A2I0XAR7_9ASPA; Zinc finger protein AZF2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56200.15e-08C2H2 family protein