PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_32427
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 514aa    MW: 55901 Da    PI: 6.4372
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_32427genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.6e-30197256159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dg++WrKYGqK  kg+++pr+YYrCt a  Cpv+k+v+r+a d +++++tYeg+Hnh+
  PEQU_32427 197 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCAVDMSILITTYEGNHNHP 256
                 58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-31182258IPR003657WRKY domain
SuperFamilySSF1182902.62E-26190258IPR003657WRKY domain
PROSITE profilePS5081128.254192258IPR003657WRKY domain
SMARTSM007747.6E-36197257IPR003657WRKY domain
PfamPF031064.3E-26198256IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    Send to blast
LFSQEDQIES TKAEIGEVKE ENQRLKNLLS QIVKDYQSLQ MHFFDIVKQE QPNLVKNSPA  60
NELTAISHES EETELVSLRL GMNTVARHKK LEEKMMMKTN TKSKEDGHVE EEEEEGLTLG  120
LDCKFEGYDD KNNEYRDLAS NPSSDDSIEE IKDEAGKSCP PNKILKNLRS GDDEVLQQTH  180
AKKARVSVRV RCQTPTMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAPACP VRKQVQRCAV  240
DMSILITTYE GNHNHPLPMS ATAMASTTSA AASMLITGSS SSHSSGIPAA FPSSTPPIIT  300
GINSGLHNLN FSLSNNPRST TPFYLPNTTI SPSPSYSTIT LDLTTPPSST TQTSQFNKFS  360
PMSNSSSSFS ISMPSSWSSR TGYMSCAALD QSYKPNYPQD SFYQSYIQNS APTSSMTQNF  420
CTDSIAKAIT SDPSFQSVLQ AAITSYVGAS GSQSGEVAHH GQSYGGKDNT TASNLFGLSV  480
PSSSSAQQGS LMAVSSSKST ASASPVDISW DNKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20184258174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020595479.10.0probable WRKY transcription factor 72
TrEMBLA0A2I0XJ180.0A0A2I0XJ18_9ASPA; Putative WRKY transcription factor 72
STRINGXP_008809713.11e-148(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-66WRKY DNA-binding protein 72