PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_32963
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 250aa    MW: 27938.6 Da    PI: 7.8981
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_32963genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.51.1e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd  l  +v+++G+g +W + +++ g++R++k+c++rw++yl
       PEQU_32963 14 RGPWSPEEDATLRSYVERHGTGgNWISLPQKAGLKRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
2Myb_DNA-binding42.41.6e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T+eEd ++  + k  G++ W+ Ia+++  gRt++++k++w++
       PEQU_32963  69 GGFTEEEDNIIFSLYKTIGSR-WSVIASHLH-GRTDNDVKNYWNT 111
                      569******************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129420.995966IPR017930Myb domain
SuperFamilySSF466892.2E-2811109IPR009057Homeodomain-like
SMARTSM007172.0E-111364IPR001005SANT/Myb domain
PfamPF002496.4E-161462IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.8E-251569IPR009057Homeodomain-like
CDDcd001672.36E-81662No hitNo description
PROSITE profilePS5129414.72367117IPR017930Myb domain
SMARTSM007174.1E-1267115IPR001005SANT/Myb domain
PfamPF002493.1E-1269111IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.2E-2370117IPR009057Homeodomain-like
CDDcd001677.99E-1071113No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009785Biological Processblue light signaling pathway
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MGRAPCCDKA NVKRGPWSPE EDATLRSYVE RHGTGGNWIS LPQKAGLKRC GKSCRLRWLN  60
YLRPDIKHGG FTEEEDNIIF SLYKTIGSRW SVIASHLHGR TDNDVKNYWN TKLMKKIMAA  120
GGSINTPLSN IQIANKLHHP SPSPSVTSPP AQIPVMKTEA AFFPVATLEP SFPYVSASSS  180
SMTVDEGFRN GYINWIDEEI CFEQAPAFFP ELGFSSWTEL LGGFMNDDSR TILWPNADAK  240
QQGVYQSLYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-25141177108B-MYB
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020599635.10.0transcription factor RAX2-like
TrEMBLA0A455LAB21e-126A0A455LAB2_9ASPA; Transcription factor MYB36-like protein
STRINGGLYMA17G35020.24e-77(Glycine max)
STRINGXP_008795486.12e-77(Phoenix dactylifera)
STRINGGSMUA_Achr7P25060_0013e-77(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP13538412
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.14e-74MYB family protein