PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_32989
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 268aa    MW: 31026.4 Da    PI: 7.2611
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_32989genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.61.7e-171096390
        FAR1  3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                Y+ YA+++GFsv  ++s++  ++++i++++f C k g+++e++ + ++ + ++a  rt C+ +++   + +g w+v+k+   HnH+la
  PEQU_32989 10 YCVYAHHIGFSVMEDHSSYWPNSKNIKNNDFICGKDGHKKESNPT-DTVKFRKADMRTRCQIMVRNAIDVEGIWKVKKFIGIHNHPLA 96
                99**************************************99888.8899999*************9999****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.7E-151096IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
HNEQETYESY CVYAHHIGFS VMEDHSSYWP NSKNIKNNDF ICGKDGHKKE SNPTDTVKFR  60
KADMRTRCQI MVRNAIDVEG IWKVKKFIGI HNHPLAKSGE KHLMCSSRKI SELNANLLRS  120
MTRSGIRATD AYNFMATEVG VENLECMKGD SYNFIQRERR ERIEQGDVNS LIQLFMKRQA  180
KDTMFAELKL MSVELTSFFW SEGLSRLDYD CFGDVIIFDT SFRLNKYNLC SPFMGVNHHW  240
QKVLSGVDFL SDEIIDSFVG CLSPIIQI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592994.11e-138uncharacterized protein LOC110033378
TrEMBLA0A2I0VPA51e-84A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A2I0X9W02e-84A0A2I0X9W0_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-22FAR1-related sequence 5