PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_33016

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 76aa MW: 8915.11 Da PI: 9.7198

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_33016	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	37	1.1e-11	15	76	3	66
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkakl 66 Y+ Y ++vGF++rk +s++ ++ ++i++++f C k g++e++ ++ + + ++++tr+gC+a++ PEQU_33016 15 YCVYVHNVGFTIRKYHSSYWSNFKKIKTKNFICGKAGHKESDFTD--TVKFKKTNTRIGCQAMV 76 999**********************************999888..77888999*****96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.5E-8	15	76	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 76 aa Download sequence Send to blast
LRTDVHNDQE AYESYCVYVH NVGFTIRKYH SSYWSNFKKI KTKNFICGKA GHKESDFTDT 60 VKFKKTNTRI GCQAMV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020589909.1	4e-28	uncharacterized protein LOC110031142
TrEMBL	A0A2I0VFB6	5e-15	A0A2I0VFB6_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87