PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_33786
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family M-type_MADS
Protein Properties Length: 157aa    MW: 17942.4 Da    PI: 5.2566
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_33786genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.63.2e-13140443
                -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
      SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                en++ r+ t+  R +g+  KA+ELSvLC+++v+v  fs++
  PEQU_33786  1 ENSRARHATYMTRMTGLKRKAFELSVLCGVDVLVASFSPE 40
                799********************************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF554553.27E-12168IPR002100Transcription factor, MADS-box
PROSITE profilePS5006613.245138IPR002100Transcription factor, MADS-box
PfamPF003192.4E-12140IPR002100Transcription factor, MADS-box
SMARTSM004320.0046149IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
ENSRARHATY MTRMTGLKRK AFELSVLCGV DVLVASFSPE LNAVQSWPEK DSDEFCRTKE  60
RYVQFRRSEM GSQNHSTIFP SLPLVSQEML AMRSKLIEIR ERLSFLEAEA SPNAAMVSSQ  120
FQQDQTAPQE QNTIPLTPFL DDISMAMYQD SSFLIHL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596673.11e-106uncharacterized protein LOC110036540
TrEMBLA0A455LA633e-35A0A455LA63_9ASPA; MADS-box protein-like protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.15e-10AGAMOUS-like 30