PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_33988
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 162aa    MW: 19209.7 Da    PI: 9.4331
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_33988genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.51.4e-101573390
        FAR1 33 fvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                fvC k g+++e k   e+ + +ra tr  C  +++   +++++w v+k+ + HnH+la
  PEQU_33988  1 FVCGKVGFKKELKII-ETVKYKRADTRSCCPVMIQYAVDEEDNWTVKKFIESHNHSLA 57
                9*********99888.99999**********************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.9E-8157IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
FVCGKVGFKK ELKIIETVKY KRADTRSCCP VMIQYAVDEE DNWTVKKFIE SHNHSLAGTS  60
KIDYDFFGNV CKIHLSVTHI QEIAYKDSMR GDTYQIMKLN ILLRIWMTTT NTTWVVNFDI  120
LSLDIQYSYR KFEMMGLLCA YTLRVLKFLY IKKIPYKYLL LR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.27e-06FAR1 family protein