PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_34520

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 135aa MW: 15501.8 Da PI: 9.4433

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_34520	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.3	7.2e-20	22	108	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y+ YA+++GF+ rk++s ++++ ++++fvC k g+++e k++ + r +ra+t tgC a+++ + +g+w v+k+ + HnH+la PEQU_34520 22 YCLYAHHIGFTARKEHSGFLPNSKKLKTKDFVCGKAGFKKELKDT-ITVRFKRANTMTGCPAMIRYFVDLEGNWSVNKFIESHNHPLA 108 999************************************9988.99999*********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	7.8E-18	22	108	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 135 aa Download sequence Send to blast
SPDTEKLLNA VVQNENEAYE QYCLYAHHIG FTARKEHSGF LPNSKKLKTK DFVCGKAGFK 60 KELKDTITVR FKRANTMTGC PAMIRYFVDL EGNWSVNKFI ESHNHPLAED GDKHLLRSSR 120 KMCDISAYIL RSMTK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020573853.1	2e-90	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020581377.1	2e-90	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2I0VS86	9e-40	A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-10	FAR1-related sequence 10