PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_35243

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 449aa MW: 51697.8 Da PI: 5.6771

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_35243	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.5	1e-08	49	91	48	90
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++ + +++ trt+Ck +++ + +++w v+k+ ++HnH+la PEQU_35243 49 MVTVKFKKTDTRTDCKVMVRFVVDLEDNWTVAKFIENHNHPLA 91 4555678999************9**************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.9E-6	45	91	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence Send to blast
MDVSLNVEMP EELHPSFTLN FEDQRTLRNS RSKIIFVEKL TTTKKFNNMV TVKFKKTDTR 60 TDCKVMVRFV VDLEDNWTVA KFIENHNHPL AESGDEHFLR SSRRISELNV DVLRSMTGSR 120 IRATHAYNFI TTDVDGDNMF AWDFQIDESG RLTNIFLSDG LSRLDYDCFR DVIIFYTSYK 180 LNKYNLCCAP FMGVNHHTDY FIGLETIMKS WHRNKKDEDF KCGHSVTTPM IKINPVLRQA 240 VLFYIRKLYS MFKQELLNDL CEITAKLSVK IEAKYYVMVD KVNCCYCVTP LFLLPVYQGN 300 ILSVLLRYSA VCVITVCVTA DLIVVTPQFA ALLRVMCCIT LRIFLILPPI KSVLLLCSPC 360 YSADYECKDF QLYMPSICSE RCLGSQEAQV LEENVDTKFS LDEETTEPAG FEQISTPSAA 420 SIVEYPDRSL IPTEMQEVID QCLARYTGQ

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence Send to blast

MDVSLNVEMP EELHPSFTLN FEDQRTLRNS RSKIIFVEKL TTTKKFNNMV TVKFKKTDTR  60
TDCKVMVRFV VDLEDNWTVA KFIENHNHPL AESGDEHFLR SSRRISELNV DVLRSMTGSR  120
IRATHAYNFI TTDVDGDNMF AWDFQIDESG RLTNIFLSDG LSRLDYDCFR DVIIFYTSYK  180
LNKYNLCCAP FMGVNHHTDY FIGLETIMKS WHRNKKDEDF KCGHSVTTPM IKINPVLRQA  240
VLFYIRKLYS MFKQELLNDL CEITAKLSVK IEAKYYVMVD KVNCCYCVTP LFLLPVYQGN  300
ILSVLLRYSA VCVITVCVTA DLIVVTPQFA ALLRVMCCIT LRIFLILPPI KSVLLLCSPC  360
YSADYECKDF QLYMPSICSE RCLGSQEAQV LEENVDTKFS LDEETTEPAG FEQISTPSAA  420
SIVEYPDRSL IPTEMQEVID QCLARYTGQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020574582.1	1e-71	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2I0X846	4e-41	A0A2I0X846_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	2e-15	FAR1-related sequence 3