PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_35420
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 108aa    MW: 12781.8 Da    PI: 8.8459
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_35420genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.26.1e-09648345
        FAR1  3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeek 45
                Y +YA+ vGF+vr+++s++   +++i+++++ C k g+++e++
  PEQU_35420  6 YYAYAHYVGFTVRNDHSSYWPSSKQIKMKDYICEKAGRKRESQ 48
                899***********************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.9E-6648IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
EAYVQYYAYA HYVGFTVRND HSSYWPSSKQ IKMKDYICEK AGRKRESQLM NCAPFVGVNH  60
HWQNVLFVVE EITYNCKKFE MMGLLCAYTL RVLHAVNVTK IPDKYFLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020589909.16e-18uncharacterized protein LOC110031142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-08FAR1-related sequence 10