PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_35580

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 262aa MW: 29969.6 Da PI: 6.7679

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_35580	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	97.3	2.4e-30	12	87	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel.vglkktLvfykgrapkgektdWvmheyrl 128 +ekew+fFs+rd+ky++g+r+nra+ sgyWkatg+dk++l+ +g + +g+kk L+fy+gr pkg+kt+Wvmheyrl PEQU_35580 12 GEKEWFFFSPRDRKYPNGNRPNRAAGSGYWKATGTDKPILAPDGIQcIGVKKALIFYQGRPPKGTKTEWVMHEYRL 87 689************************************955444*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	39.005	1	116	IPR003441	NAC domain
SuperFamily	SSF101941	7.32E-37	7	115	IPR003441	NAC domain
Pfam	PF02365	4.1E-14	15	87	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence Send to blast
MCCVVSEKAF FGEKEWFFFS PRDRKYPNGN RPNRAAGSGY WKATGTDKPI LAPDGIQCIG 60 VKKALIFYQG RPPKGTKTEW VMHEYRLLDS SFPCHAKRTK DSMRLDDWVL CRVKHNGAVQ 120 AENGEVQVSL KSQQSANFSN QQDNQQHLRI EKSSFFEWSD TQLLGYLLGS TENGEISKLG 180 DSESWSGSRC AELGEYFDVQ QESLQLEAKA HGTMKRSCFS SVVDELTLQP PSKRLQCSNN 240 EQYFWHEDIF SFDQGLMEFL RS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-46	4	113	61	162	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-46	4	113	61	162	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-46	4	113	61	162	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-46	4	113	61	162	NO APICAL MERISTEM PROTEIN
3swm_A	2e-46	4	113	64	165	NAC domain-containing protein 19
3swm_B	2e-46	4	113	64	165	NAC domain-containing protein 19
3swm_C	2e-46	4	113	64	165	NAC domain-containing protein 19
3swm_D	2e-46	4	113	64	165	NAC domain-containing protein 19
3swp_A	2e-46	4	113	64	165	NAC domain-containing protein 19
3swp_B	2e-46	4	113	64	165	NAC domain-containing protein 19
3swp_C	2e-46	4	113	64	165	NAC domain-containing protein 19
3swp_D	2e-46	4	113	64	165	NAC domain-containing protein 19
4dul_A	2e-46	4	113	61	162	NAC domain-containing protein 19
4dul_B	2e-46	4	113	61	162	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020597561.1	0.0	NAC transcription factor 29-like
TrEMBL	A0A2H3XDD9	3e-75	A0A2H3XDD9_PHODC; NAC transcription factor 29-like
STRING	XP_008782049.1	6e-76	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13797	19	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	4e-52	NAC domain containing protein 2