PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_35829

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 131aa MW: 15193.2 Da PI: 4.9706

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_35829	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.6	7e-07	2	32	60	90
FAR1 60 tgCkaklkvkkekdgkwevtkleleHnHela 90 t+C a+++ + +g+w v+k+ + HnH+la PEQU_35829 2 TDCPAMIRYFVDLEGNWSVKKFIESHNHPLA 32 89***************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	8.7E-5	2	32	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence Send to blast
MTDCPAMIRY FVDLEGNWSV KKFIESHNHP LADDGDKHLP RSSRKMCDIS VDILRSMTKS 60 GIRTSDAFRF LATEVGGVEN IDCTKRDAYN FIQRERRVQI ELSDVNSLIQ LFTTRQVEDP 120 MFAWDFQIDE A

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020581377.1	5e-84	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2I0X5F8	7e-46	A0A2I0X5F8_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-10	FAR1-related sequence 5