PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_36425

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 70aa MW: 8132.48 Da PI: 11.769

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_36425	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.1	4.1e-28	18	67	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 pr+rW++eLH+rFv+ave+LGG+ kAtPk+il lm+v+gL+++hvkSHLQ PEQU_36425 18 PRIRWSNELHNRFVRAVESLGGQTKATPKRILLLMGVNGLSISHVKSHLQ 67 8************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	7.0E-25	14	67	IPR009057	Homeodomain-like
PROSITE profile	PS51294	11.962	14	70	IPR017930	Myb domain
SuperFamily	SSF46689	6.09E-14	16	68	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.6E-22	18	69	IPR006447	Myb domain, plants
Pfam	PF00249	1.6E-8	21	69	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 70 aa Download sequence Send to blast
MEICDKRRVR QYNRSEAPRI RWSNELHNRF VRAVESLGGQ TKATPKRILL LMGVNGLSIS 60 HVKSHLQVLH

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	5e-16	19	67	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	5e-16	19	67	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	5e-16	19	67	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	5e-16	19	67	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020588172.1	6e-43	protein PHOSPHATE STARVATION RESPONSE 3-like
Swissprot	Q700D9	3e-19	MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBL	A0A2I0VE68	2e-38	A0A2I0VE68_9ASPA; Myb family transcription factor
STRING	XP_008811121.1	4e-26	(Phoenix dactylifera)
STRING	GSMUA_Achr9P30700_001	2e-26	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5493	37	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-22	G2-like family protein