PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_36710
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 167aa    MW: 18859.1 Da    PI: 11.3075
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_36710genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.00028861093255
                 ..TTS-STCHHHHHHHHHHHHHHH CS
         HLH  32 kapskKlsKaeiLekAveYIksLq 55 
                 +  s K + a++L++A  YIk Lq
  PEQU_36710  86 ASISAKSDTASVLQEAAAYIKFLQ 109
                 56789999***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.107.5E-588115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-688121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MIPARPLTHP VHPLPLHRKR RRIAKLLLKL LPRFFLGSGA PPQSAREEKK KMMMVTDMAN  60
QNPRIHHESF LPLSKRLRTG PAREEASISA KSDTASVLQE AAAYIKFLQD QLQVLSTPYL  120
RTFPHGKLQE GEKSRSLRNR GLCLMPVDET VLIARSNGAD IWAPISK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11721RKRRR
21822KRRRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020578045.17e-91transcription factor bHLH113-like isoform X1
SwissprotQ7XJU24e-25BH153_ARATH; Transcription factor bHLH153
STRINGOMERI04G13740.12e-28(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5272812
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.52e-27bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]