PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_37413
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 139aa    MW: 15984.3 Da    PI: 10.2045
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_37413genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.83.2e-221198290
        FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 Y++YA+++GFsvrk++++   ++++i +++f C k g+++e + + ++ + +raet tgC a+++ + +k+g+w v+kl + HnH+la
  PEQU_37413 11 VYCAYAHHIGFSVRKEHTTFWPNSRNIRTKDFICGKAGFKKELEIT-KTVKYKRAETTTGCPAMIRYEVDKEGNWGVKKLIESHNHSLA 98
                7*****************************************9988.89999***********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.1E-201198IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MVHNEKEAYE VYCAYAHHIG FSVRKEHTTF WPNSRNIRTK DFICGKAGFK KELEITKTVK  60
YKRAETTTGC PAMIRYEVDK EGNWGVKKLI ESHNHSLANP GDKHLLRSSR KISKVNADVL  120
RSMTQSGIRP KDAFNFLAQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592536.18e-82protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2I0VV982e-53A0A2I0VV98_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-15FAR1-related sequence 5