PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_37461

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 167aa MW: 19605.5 Da PI: 9.9667

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_37461	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.2	1.2e-22	47	134	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA+++GFs rk++++ s++++ i++++f C k g+++e k + e+ + +r+etrtgC a+++ + +++g+w v+kl + HnH+l+ PEQU_37461 47 VYCAYAHHIGFSGRKDHTTFSTNSRIIKTKDFICGKAGFKKELKIT-ETVKYRREETRTGCLAMIRYRVDEEGNWTVKKLIESHNHSLV 134 7***************************************9988.999999********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.2E-20	47	134	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence Send to blast
MFFELSIESN ILFSCLQFRE SNASCTEKRT NILLQTLVRN EKKTYEVYCA YAHHIGFSGR 60 KDHTTFSTNS RIIKTKDFIC GKAGFKKELK ITETVKYRRE ETRTGCLAMI RYRVDEEGNW 120 TVKKLIESHN HSLVNPDDKH LLRSRRKISK INADVLRFMT QSENFLA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020599220.1	1e-108	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2I0VV98	8e-41	A0A2I0VV98_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-15	FAR1-related sequence 5