PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_38345
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 163aa    MW: 18313.1 Da    PI: 11.953
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_38345genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.21.3e-15961255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfs...lgkfgtaeeAakaaiaarkkleg 55
                +++GVr ++ +gr++AeIrd ++    r+r +   lg+f+t+eeAa+a+++a+++l+g
  PEQU_38345  9 HFRGVRKRP-WGRYAAEIRDpWK----RTRGWlgaLGTFDTPEEAAAAYDQAARALRG 61
                69*******.**********773....3444422268*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.744969IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-27969IPR001471AP2/ERF domain
PfamPF008474.0E-9961IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-19969IPR016177DNA-binding domain
CDDcd000182.36E-16968No hitNo description
SMARTSM003806.6E-31975IPR001471AP2/ERF domain
PRINTSPR003679.2E-121021IPR001471AP2/ERF domain
PRINTSPR003679.2E-125171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MASRGGEVHF RGVRKRPWGR YAAEIRDPWK RTRGWLGALG TFDTPEEAAA AYDQAARALR  60
GPKAKTNFPS PPPPPPPPPI RLQLDLNQLP CHLRSHYALA SPPPPPPPPA PRRPPRCFSE  120
AFCNANLRRL GNRSGVFPSI STSLRHLCRR TLRRRFDFVD LSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1710691572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590934.11e-113ethylene-responsive transcription factor 12-like
SwissprotQ94ID64e-32ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A2I0W9W21e-38A0A2I0W9W2_9ASPA; Ethylene-responsive transcription factor 12
STRINGGSMUA_Achr6P00240_0011e-32(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.15e-25ERF domain protein 12