PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_38604
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 429aa    MW: 47260.9 Da    PI: 5.6947
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_38604genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.4e-29222280259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  Dg++WrKYGqK+ kgs++pr+YYrCt+a gCpv+k+v+r+aed++++++ Yeg+Hnh+
  PEQU_38604 222 TDGCHWRKYGQKMAKGSNCPRAYYRCTMAvGCPVRKQVQRCAEDQTILITSYEGKHNHP 280
                 7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.0E-32206282IPR003657WRKY domain
SuperFamilySSF1182907.72E-27214282IPR003657WRKY domain
PROSITE profilePS5081128.105216282IPR003657WRKY domain
SMARTSM007741.4E-34221281IPR003657WRKY domain
PfamPF031063.6E-25223280IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MESDESPTVI NEMDFFSLEK IGAETEQEGY QHPILEQNDV TIDTGLQLLS GSGSDLSLGD  60
GFPLAYRTND EKKSKMTTMK AKMRQIDDEN QRLKNSLARL NENYNYLHMQ FIEVMNKNKC  120
INENTNLSYA VTDEKMESNE EGRYRIVPWK FWHDHDGRSS AEERFTADYC ALKSSFNGDQ  180
KEGKETLPIF SSTSMSREQA QESTIRKARV SVRVRSDAPM ITDGCHWRKY GQKMAKGSNC  240
PRAYYRCTMA VGCPVRKQVQ RCAEDQTILI TSYEGKHNHP LPPAAMSMAS TTSAAASMLL  300
SGSISSADSL MKPNFLAQTM LSCPSGLATI SASAPFPTVT LDLTQPPDVL QFSKPPLQQQ  360
IYIPQVSGQS LQCGEREELA IADRVSAAAA AITTNPKFTA ALAAANSSVN GAAHENGGQP  420
RGTEDTQSN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-22208284176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020571060.10.0probable WRKY transcription factor 31
SwissprotQ9XEC31e-91WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2I0BFJ61e-118A0A2I0BFJ6_9ASPA; WRKY transcription factor 6
STRINGEOX932431e-107(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22070.12e-67WRKY DNA-binding protein 31