PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_38610
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 177aa    MW: 19790.4 Da    PI: 8.5163
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_38610genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47e-105999954
                HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 r RR+ri ++f  L++l+P        K++ +++Le+A++Y+k L
  PEQU_38610 59 ARERRHRISDRFRILKSLVPGG-----SKMDTVSMLEEAIHYVKFL 99
                699*****************95.....5****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.2885099IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.51E-1455111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1156104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.72E-1356103No hitNo description
SMARTSM003532.4E-1256105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-75999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MENFFNYCNQ QHPTSSSSPP PPLQNHHHFL KERRKAIVSH APKPGGGAKL STDPQSVAAR  60
ERRHRISDRF RILKSLVPGG SKMDTVSMLE EAIHYVKFLK AQIWLHQAAL MLHGHQESSP  120
FTLISNSNDM IASPPFSQVM LDDSMVDSVI PAAVPNLVNG SFQGEQQMTA DHYGFNY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020684454.19e-90transcription factor bHLH140
TrEMBLA0A2I0VP912e-88A0A2I0VP91_9ASPA; Transcription factor LAX PANICLE
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP85533243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.11e-31APRATAXIN-like