PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_39184
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family SRS
Protein Properties Length: 204aa    MW: 21995.6 Da    PI: 7.5544
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_39184genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702111.41.3e-34101191494
      DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrelkskkqsalsstklssa 94 
                 g+++CqdCGnqakkdC+h+RCRtCCk+rg+dC+th+kstWvpaa+rrer+ +++ +++  a s+    +a k++r l  + q++++s + +s+
  PEQU_39184 101 GSSTCQDCGNQAKKDCSHRRCRTCCKNRGYDCSTHIKSTWVPAARRRERHLTASDSAAAVAVSSsgIISALKKPRLL--SFQTTTTSHEYNSG 191
                 6789********************************************96554444444443332355666667665..44444444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051428.7E-32102187IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016233.6E-26104146IPR006510Zinc finger, lateral root primordium type 1
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
LNYGIAEMVG LRDVYVVAPA ASFHPPAAYH EQFLPSAEAH SIIPLLTASP YLADDDSRSS  60
MIHLWQSHPL PSLQAPALPQ NPNPSPSPEL ESPDILFVTG GSSTCQDCGN QAKKDCSHRR  120
CRTCCKNRGY DCSTHIKSTW VPAARRRERH LTASDSAAAV AVSSSGIISA LKKPRLLSFQ  180
TTTTSHEYNS GTLPLSSETG SSHQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020597847.11e-144protein LATERAL ROOT PRIMORDIUM 1-like, partial
TrEMBLA0A2I0WD092e-77A0A2I0WD09_9ASPA; Uncharacterized protein
STRINGXP_008803345.15e-53(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35793679
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.31e-29Lateral root primordium (LRP) protein-related