PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_39588
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 49aa    MW: 5667.67 Da    PI: 9.4672
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_39588genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.5e-091445132
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                     +g W++eEde+l++ + ++G g+W+++++  g
       PEQU_39588 14 KGLWSPEEDEKLYNHIIRFGVGCWSSVPKLTG 45
                     688************************99765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.9E-13643IPR009057Homeodomain-like
SuperFamilySSF466897.03E-9745IPR009057Homeodomain-like
PROSITE profilePS5129412.695949IPR017930Myb domain
PfamPF002495.3E-71443IPR001005SANT/Myb domain
CDDcd001671.97E-51742No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 49 aa     Download sequence    Send to blast
MGRHSCCLKQ KLRKGLWSPE EDEKLYNHII RFGVGCWSSV PKLTGLFAF
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021634721.13e-26transcription repressor MYB6-like
SwissprotQ8LPH66e-23MYB86_ARATH; Transcription factor MYB86
TrEMBLA0A1Q3B3739e-26A0A1Q3B373_CEPFO; Myb_DNA-binding domain-containing protein
STRINGcassava4.1_033233m5e-25(Manihot esculenta)
STRINGXP_010102491.15e-25(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.13e-25myb domain protein 86