PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_39742
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 253aa    MW: 27799.8 Da    PI: 10.9412
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_39742genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.52.6e-112285160
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkr 60
                +W+++ + +Li+ar e   +l+rg+lk+++W+ev++++      ++  rs  qCk++++ l+k+
  PEQU_39742 22 CWSENATSVLIDARGEHFLKLNRGNLKQKQWQEVAEVVssrdDYTKPPRSDLQCKNRIDTLKKK 85
                7*************************************8554445558999**********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-162092No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
NLTLALPIQS RSPSSAGGRE DCWSENATSV LIDARGEHFL KLNRGNLKQK QWQEVAEVVS  60
SRDDYTKPPR SDLQCKNRID TLKKKSKIGK SKMSVFTGAG LSSIIKTPPF TPQLPSPTPM  120
SPLPPQPALT SSTTKSLLRP VNGGRTRVGM GGMRDLAQAI LKFGQVYQRV ESSKLQETME  180
MEKQRMGFAR ELELQRMQFF KKTQMELSKL RSYLPPPGVG GGGGGGSSNN YLHHSRRHHH  240
QLAGNSSING TSG
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020697655.11e-72trihelix transcription factor ASIL2
SwissprotQ9LJG82e-33ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2I0WDT23e-71A0A2I0WDT2_9ASPA; Uncharacterized protein
STRINGXP_010264262.16e-63(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24043069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.16e-33sequence-specific DNA binding transcription factors