PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_40030
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 133aa    MW: 15394.1 Da    PI: 4.6713
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_40030genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.62.5e-071242448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Ia++++ gRt++++k+ w+++l
       PEQU_40030  1 WSAIAAKLP-GRTDNEIKNVWHSHL 24
                     *********.***********9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.07E-7131IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.5E-11125IPR009057Homeodomain-like
CDDcd001675.75E-4124No hitNo description
PROSITE profilePS5129415.05128IPR017930Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
WSAIAAKLPG RTDNEIKNVW HSHLKKRLNP NQSMKDSKRR NRNNSMMEDM KLQKYAEEPG  60
CSTEDSMDFL RHLPEIGEIL TSEAQTESNS WAGEEEEEES AVKNFDLLRS SNEDDIRFWM  120
SLLAEAGNLE CFK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020570793.15e-93myb-related protein Myb4-like
TrEMBLA0A2I0X7N64e-49A0A2I0X7N6_9ASPA; Myb-related protein Myb4
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3778823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.26e-15myb domain protein 15