PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_40289

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bZIP

Protein Properties

Length: 53aa MW: 6457.48 Da PI: 10.4626

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_40289	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.7	4.4e-07	1	41	20	60
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 20 sRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +R++ ++e +L++ +L+a Nk L +e+++l+k+v+ l PEQU_40289 1 CREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLV 41 9************************************9885 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.4E-4	1	40	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 53 aa Download sequence Send to blast
CREKQRKEAS RLQTVNRKLT AMNKLLMEEN DRLQKQVSHL VYENGYMRQQ LHI

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009388964.1	1e-29	PREDICTED: homeobox-leucine zipper protein HOX32-like
Refseq	XP_020578111.1	8e-31	homeobox-leucine zipper protein HOX32-like
Swissprot	A2XK30	1e-29	HOX32_ORYSI; Homeobox-leucine zipper protein HOX32
Swissprot	Q6AST1	1e-29	HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBL	A0A2G9GPZ1	3e-28	A0A2G9GPZ1_9LAMI; Uncharacterized protein
TrEMBL	M0S7J6	5e-28	M0S7J6_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr2P13050_001	8e-29	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP40913	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34710.1	5e-29	HD-ZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Itoh J,Hibara K,Sato Y,Nagato Y Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice. Plant Physiol., 2008. 147(4): p. 1960-75 [PMID:18567825] Li YY, et al. Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice. Rice (N Y), 2016. 9(1): p. 46 [PMID:27624698]