PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_40453
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HD-ZIP
Protein Properties Length: 150aa    MW: 17090.9 Da    PI: 10.0569
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_40453genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.22.5e-17964256
                T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                rk+ ++t+eq  +Le+ F++ +  ++ +++  LAk+l+L  rqV vWFqNrRa+ k
  PEQU_40453  9 RKKLRLTREQSAVLEDKFNEhSTLLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 64
                678899*************977789*****************************98 PP
2HD-ZIP_I/II117.48.1e-38998190
  HD-ZIP_I/II  1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
                 +kk+rl++eq+++LE++F+e++  L+p++K +la++L+l+prqv+vWFqnrRARtk+k++E+d+e+L+r++++l+een+rL+ + +eLr +
   PEQU_40453  9 RKKLRLTREQSAVLEDKFNEHStLLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKKTEVDCEFLRRRCETLAEENRRLHGDLQELR-S 98
                 69*******************9778***************************************************************9.4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.39566IPR001356Homeobox domain
SMARTSM003891.8E-14770IPR001356Homeobox domain
SuperFamilySSF466896.42E-17875IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.2E-16869IPR009057Homeodomain-like
PfamPF000468.7E-15964IPR001356Homeobox domain
CDDcd000861.59E-13967No hitNo description
PROSITE patternPS0002704164IPR017970Homeobox, conserved site
SMARTSM003407.1E-1666109IPR003106Leucine zipper, homeobox-associated
PfamPF021832.2E-76699IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
EEGGSGGCRK KLRLTREQSA VLEDKFNEHS TLLNPKQKLA LAKQLNLRPR QVEVWFQNRR  60
ARTKLKKTEV DCEFLRRRCE TLAEENRRLH GDLQELRSLK LAAVTPLHAS MLMMCPSCEG  120
VALGETDDVA MVRASPPLMK DTMKKKTLCS
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020597570.11e-105homeobox-leucine zipper protein HOX15-like
SwissprotA2XE762e-51HOX19_ORYSI; Homeobox-leucine zipper protein HOX19
SwissprotA2YW034e-51HOX27_ORYSI; Homeobox-leucine zipper protein HOX27
SwissprotQ6YPD04e-51HOX27_ORYSJ; Homeobox-leucine zipper protein HOX27
SwissprotQ8GRL42e-51HOX19_ORYSJ; Homeobox-leucine zipper protein HOX19
TrEMBLA0A2I0WKN96e-66A0A2I0WKN9_9ASPA; Homeobox-leucine zipper protein HOX19
STRINGMigut.B01361.1.p2e-51(Erythranthe guttata)
STRINGEFJ319831e-51(Selaginella moellendorffii)
STRINGEFJ378671e-51(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20553698
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.13e-40homeobox from Arabidopsis thaliana