PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_40864
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 156aa    MW: 17298 Da    PI: 10.3397
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_40864genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.00031671011554
                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +i ++ + L++l+ +      +K + a++L++A+ YIk L
  PEQU_40864  67 KIGERVSALQQLVSPF-----GKSDTASVLTEATAYIKFL 101
                 6666777788888877.....899**************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.65552101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.01E-463106No hitNo description
SuperFamilySSF474592.62E-964113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-766109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MMVTKMADQK RRNHYDPFLP TPKRLKNEAL EGNGSLSHKV LFFFLSLIKF LFCINPINGG  60
LQEKKDKIGE RVSALQQLVS PFGKSDTASV LTEATAYIKF LHDQIKVLSA PYLHSSPNDR  120
LQSGSLRSRG LCLIPVAATV QIARSNGADI WAPTTN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020598677.12e-90transcription factor bHLH113-like
RefseqXP_020598678.12e-90transcription factor bHLH113-like
RefseqXP_020598679.12e-90transcription factor bHLH113-like
SwissprotQ7XJU23e-40BH153_ARATH; Transcription factor bHLH153
TrEMBLM0TB211e-46M0TB21_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P28760_0012e-47(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5272812
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.51e-42bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]