PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_41106

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 65aa MW: 7435.56 Da PI: 10.9417

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_41106	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.5	1.2e-08	28	54	3	29
HHHHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 3 rahnerErrRRdriNsafeeLrellPk 29 r+h e+E+rRR+ri+s +++Lr +l PEQU_41106 28 RNHREAEKRRRERIKSHLDRLRVILSC 54 78********************99976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.94E-6	23	56	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	9.14	25	65	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.1E-6	28	54	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.9E-5	29	53	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 65 aa Download sequence Send to blast
MASFFPVEMA GAARTDHVPI DRAVLASRNH REAEKRRRER IKSHLDRLRV ILSCDPKVCV 60 NTNHG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010922068.1	4e-13	transcription factor bHLH106
STRING	XP_008786854.1	2e-11	(Phoenix dactylifera)