PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_41149

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

WOX

Protein Properties

Length: 181aa MW: 19292.9 Da PI: 9.4877

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_41149	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.5e-09	3	40	24	57
S--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 24 ypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +p ++e++++ ++l ++ +++V++WFqNr+ + k+ PEQU_41149 3 NPPRDEIRRIRSQLqvygQVGDANVFYWFQNRKSRSKH 40 7999*******************************995 PP
2	Wus_type_Homeobox	67.4	2.6e-22	1	42	24	65
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+++ei+ri+++L+ yG+++d+NVfyWFQNrk+R+++kq PEQU_41149 1 MVNPPRDEIRRIRSQLQVYGQVGDANVFYWFQNRKSRSKHKQ 42 78**************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00086	0.00532	3	42	No hit	No description
SuperFamily	SSF46689	4.94E-6	3	44	IPR009057	Homeodomain-like
Pfam	PF00046	7.1E-7	3	40	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence Send to blast
MVNPPRDEIR RIRSQLQVYG QVGDANVFYW FQNRKSRSKH KQRHLKSTPA AAAAAKSTPP 60 PLTPASSTST SGSNTKQIVT TLPALSTFFD QNFLQAPILM PELSLESSVL LPASYQISSG 120 ELSGGSPAAW DLIMQEVFPS KSAGASIGCV VSGDEEIAVA TGTATPGTVN EIKGTLYIIL 180 K

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020594396.1	1e-124	WUSCHEL-related homeobox 13-like, partial
TrEMBL	A0A2I0WCQ3	7e-62	A0A2I0WCQ3_9ASPA; WUSCHEL-related homeobox 8

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2666	34	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-22	homeobox-3