PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_41196

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

ZF-HD

Protein Properties

Length: 98aa MW: 10206.1 Da PI: 4.1948

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_41196	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	59.1	9.8e-19	62	97	3	39
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaa 39 +vrY+eClkNhA+s+GghavDGCgEf+p+ geeg+ + PEQU_41196 62 GVRYRECLKNHAVSIGGHAVDGCGEFLPA-GEEGSLD 97 69**************************9.7777655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD125774	2.0E-12	63	98	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	2.5E-16	63	97	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	5.9E-17	64	97	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	20.916	65	98	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 98 aa Download sequence Send to blast
FPLSSSLPSF AMDFDDHDEA EEEMGLSNYE PGLGNSGREK PTVTAAATAG VSDPVNRKPA 60 PGVRYRECLK NHAVSIGGHA VDGCGEFLPA GEEGSLDA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020594804.1	3e-57	zinc-finger homeodomain protein 1-like, partial
TrEMBL	A0A2I0VR63	5e-48	A0A2I0VR63_9ASPA; ZF-HD homeobox protein
STRING	XP_008812231.1	2e-24	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1431	34	120

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	1e-17	homeobox protein 22