PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_41236

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 109aa MW: 12171.9 Da PI: 10.9849

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_41236	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.4	1e-30	48	102	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+ v+qLGG+++AtPk +l++m+v+gLt++hvkSHLQ Rl PEQU_41236 48 RQRLRWTHELHERFVDSVAQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQARRL 102 58*************************************************9887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.496	45	105	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.2E-29	47	105	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.76E-16	47	106	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.6E-22	49	103	IPR006447	Myb domain, plants
Pfam	PF00249	2.5E-7	50	98	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 109 aa Download sequence Send to blast
MYQSDSIPSL PSAYNDAISL DRQLELNGNA MDTIRSVKSP ANPSLASRQR LRWTHELHER 60 FVDSVAQLGG PDRATPKGVL RVMGVPGLTI YHVKSHLQAR RLKRKNPVS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	6e-22	48	104	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	6e-22	48	104	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	6e-22	48	104	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	6e-22	48	104	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020596245.1	1e-69	myb family transcription factor PHL7-like, partial
Swissprot	Q9SJW0	2e-32	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2I0VRV2	2e-51	A0A2I0VRV2_9ASPA; Myb family transcription factor APL
STRING	XP_008794707.1	3e-41	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2220	38	96

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	9e-35	G2-like family protein