PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_41376
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ARR-B
Protein Properties Length: 212aa    MW: 24554.5 Da    PI: 8.1888
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_41376genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like69.17.3e-22161209251
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                 +r  Wt+eLH+rF+++v+qL G +kA+Pk+il++m  +gLt+e v SHLQ
  PEQU_41376 161 ARFTWTSELHTRFIDVVNQL-GVNKAVPKKILNMMATPGLTREIVVSHLQ 209
                 799*****************.***************************** PP
2Response_reg57.38.9e-201510222108
                   TCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHH CS
  Response_reg  22 gyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelv 108
                    + +v+++d++++alell ++   +D+ ++D++m++md ++ll++ + e  +lp+i+++  ++ e + +a+++Ga d+l+Kp+  eel 
    PEQU_41376  15 SCIIVTVWDHARQALELLSANGdeYDIKITDVNMSDMDEFQLLENVQHEI-NLPVIMISVDSKFEVVMNAINYGAVDYLVKPVRLEELK 102
                   454899************777678**********************8766.9*********************************9996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011027.2951109IPR001789Signal transduction response regulator, receiver domain
SMARTSM004481.9E-71105IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521722.42E-2117117IPR011006CheY-like superfamily
PfamPF000722.8E-1518102IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23004.9E-2319136No hitNo description
CDDcd001562.17E-1519113No hitNo description
Gene3DG3DSA:1.10.10.601.5E-20158209IPR009057Homeodomain-like
SuperFamilySSF466892.15E-12158209IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-18161210IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MKYSYIVFFI IKTISCIIVT VWDHARQALE LLSANGDEYD IKITDVNMSD MDEFQLLENV  60
QHEINLPVIM ISVDSKFEVV MNAINYGAVD YLVKPVRLEE LKLIWRYAVK RYLNEKKDAN  120
EIRSKNDKIS ELVKKSKYLV GDRNDDAKIE SKDDLPSRKR ARFTWTSELH TRFIDVVNQL  180
GVNKAVPKKI LNMMATPGLT REIVVSHLQV CS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020597792.12e-93two-component response regulator ARR10-like, partial
TrEMBLA0A2I0W9B12e-55A0A2I0W9B1_9ASPA; Two-component response regulator ARR10
STRINGGSMUA_Achr10P23650_0017e-53(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1204346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.15e-50response regulator 2