PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_41442
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 217aa    MW: 24584 Da    PI: 4.3822
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_41442genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.46.8e-081252348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W+ Ia  ++ gRt++++k++w+++l
       PEQU_41442  1 RWSIIAGQLP-GRTDNEIKNYWNSHL 25
                     4*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.698129IPR017930Myb domain
SuperFamilySSF466891.14E-6129IPR009057Homeodomain-like
PfamPF002491.3E-5125IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.0E-11125IPR009057Homeodomain-like
CDDcd001675.26E-5125No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
RWSIIAGQLP GRTDNEIKNY WNSHLSRRVH CFRRHGESET FIYDIGNIPS SAKRRGGRTM  60
LKNSNVVVSG SNAMDQSNPS HDHDQKQVQN DTNNILCNAS SSSTLTEKEN SSLSLDFDFD  120
LEEVLGPHGD VDAVGSMQEN EMMESRSRDC AAEKEVELGM EESGNVRTDM EKMLKWDLEC  180
LEAKLWEEDG NDHMWPWLCD VGGDTSFDES LCSWLFA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596073.11e-157myb-related protein P-like
TrEMBLA0A2I0W7J02e-99A0A2I0W7J0_9ASPA; Transcription factor MYB12
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.19e-16myb domain protein 12