PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_42075
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 221aa    MW: 26610.8 Da    PI: 8.1993
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_42075genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix62.78.6e-20279686
    trihelix  6 evlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                e ++ + +r e+++++ ++k++k lWe++s+ m ++gf r+p+qCk+kw+nl +r+k  +   +++   s++ +py+++++
  PEQU_42075  2 EPRVFLSIRAELDQSFAETKRNKRLWEAISSGMVSKGFYRTPEQCKSKWKNLLTRFKGSEVLGEEK---SRQAFPYYEEMK 79
                67889****************************************************987776664...55679*****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.737154IPR017877Myb-like domain
CDDcd122031.28E-14261No hitNo description
PfamPF138374.2E-17481No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0016592Cellular Componentmediator complex
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
XEPRVFLSIR AELDQSFAET KRNKRLWEAI SSGMVSKGFY RTPEQCKSKW KNLLTRFKGS  60
EVLGEEKSRQ AFPYYEEMKS ILSGRDQRLL SLEKEKEEEE MQEEEDEGRM TNKKKSKRAK  120
HGRGGGRVFE EVEWALKELA KWQKEREVRW LQVAEAREAE RQMAELEWKR MMEAICEERA  180
EMEKRWRERE DEWRSRQELR AERRDHIFAA IVARLGRDDG D
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020597787.11e-152trihelix transcription factor GT-3b
TrEMBLA0A2I0WLK35e-71A0A2I0WLK3_9ASPA; Trihelix transcription factor GT-3b
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125953134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-31Trihelix family protein