PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PH01000043G1650

Organism

Phyllostachys heterocycla

Taxonomic ID

38705

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys

Family

bZIP

Protein Properties

Length: 125aa MW: 14003.9 Da PI: 8.2423

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PH01000043G1650	genome	ICBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.8	4e-07	28	66	21	59
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 R RKk+++ e ++ v +L eN++L++e++ l+ + +l PH01000043G1650 28 RPRKKMRLPEVQQLVRSLAVENESLREEMQALQRACTAL 66 89*******************************999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.5E-5	28	66	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence Send to blast
MALRRMVSSI GRPHLTFPAP PPQPTGQRPR KKMRLPEVQQ LVRSLAVENE SLREEMQALQ 60 RACTALSKEN DKLETRLEQS NPQNETAPKE RKGKQQLDQQ SPEDCFVLPD LNLPAQDVAD 120 GSVH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	27	33	RPRKKMR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	PH01000043G1650

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010233917.1	1e-51	uncharacterized protein LOC100835852
Refseq	XP_025794244.1	1e-51	uncharacterized protein LOC112874890 isoform X1
TrEMBL	M0VQ72	1e-54	M0VQ72_HORVV; Uncharacterized protein
STRING	MLOC_36367.1	2e-55	(Hordeum vulgare)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51