PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000050G0250
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family EIL
Protein Properties Length: 610aa    MW: 67579.9 Da    PI: 5.9233
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000050G0250genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3436.72.2e-133384131351
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel +rmwkd+++l+r+ker+ +l   ++a++++++ +++++qa rkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++raW
  PH01000050G0250  38 EELARRMWKDRVRLRRIKERQHKLA-LQQAELEKSRPKQISDQALRKKMSRAQDGILKYMLKLMEVCNASGFVYGIIPDKGKPVSGASDNIRAW 130
                      8********************9865.66677*************************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wkekv+fd+ngpaai+ky+a+nl++++++s+   + +++hsl++lqD+tlgSLLs+lmqhc+ppqr++plekg++pPWWP+G+e+ww +lgl++
  PH01000050G0250 131 WKEKVKFDKNGPAAIAKYEADNLVAANAQSS---GVKNQHSLMDLQDATLGSLLSSLMQHCNPPQRKYPLEKGTPPPWWPSGNEEWWIALGLPR 221
                      **************************88888...89********************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX....XXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss....slrkqspkvtls 277
                       q  ppykkphdlkk+wkv+vLt vikhmsp++++ir+++r+sk+lqdkm+akes ++l vl++ee++++++    s+    s  ++++  t+s
  PH01000050G0250 222 GQI-PPYKKPHDLKKVWKVGVLTGVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREERLVHSIDNGvSEithhSAPEDRNGDTHS 314
                      **9.9****************************************************************9999996446655555689999*** PP

                      XXXXXXXXXXXXXX.XXXXXXXXXX................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XX CS
             EIN3 278 ceqkedvegkkeskikhvqavktta................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgset 339
                      +++++dv+g +e   +++++++++                                 g++   krk+ +++s+++  ++      +   + +++
  PH01000050G0250 315 SSNEYDVDGFEEAPLSTSSKDDEHGlspvaqssdehgprrremantkcpnqvvpikaGTKGPPKRKRARHSSTAIVVQR------TDDTP-ENS 401
                      ********99999989999988877888888888888888888888888875555555555555554444444443332......23333.345 PP

                      XXXXXXXXXXXX CS
             EIN3 340 elifadknsisq 351
                      ++ ++d+n+++q
  PH01000050G0250 402 RNLIPDMNRLDQ 413
                      556666666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.3E-12738286No hitNo description
Gene3DG3DSA:1.10.3180.104.9E-70160293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.57E-60166289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    Send to blast
MEHLAILATE LVDSSDFEVD GIQNLTENDV SDEEIEPEEL ARRMWKDRVR LRRIKERQHK  60
LALQQAELEK SRPKQISDQA LRKKMSRAQD GILKYMLKLM EVCNASGFVY GIIPDKGKPV  120
SGASDNIRAW WKEKVKFDKN GPAAIAKYEA DNLVAANAQS SGVKNQHSLM DLQDATLGSL  180
LSSLMQHCNP PQRKYPLEKG TPPPWWPSGN EEWWIALGLP RGQIPPYKKP HDLKKVWKVG  240
VLTGVIKHMS PNFDKIRNHV RKSKCLQDKM TAKESLIWLG VLQREERLVH SIDNGVSEIT  300
HHSAPEDRNG DTHSSSNEYD VDGFEEAPLS TSSKDDEHGL SPVAQSSDEH GPRRREMANT  360
KCPNQVVPIK AGTKGPPKRK RARHSSTAIV VQRTDDTPEN SRNLIPDMNR LDQVEIPGMA  420
NQITSFSQGD NTSEALQHRG DAQGQVHLPD AGVNNFDSAQ AANATPVSIY MGGQPVPYEG  480
CDNVRSKSGN TFPLDADSGF NNLPSSYQAL PLKQSLPLSM MDHHVVPMGI RAPADNSPYG  540
DPVIGSGIST SVPGDMQQLI DYPFYGEQDK FVGSSFEGLP LDYISISSPI PDIDDLLLHD  600
DDLMEYLGT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A4e-661662909133ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00649PBMTransfer from LOC_Os09g31400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000050G0250
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006660770.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_015696822.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-146EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0A9DKK80.0A0A0A9DKK8_ARUDO; Uncharacterized protein
STRINGOB09G21280.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-148ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]