PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000061G1340
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 247aa    MW: 26008.2 Da    PI: 10.3316
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000061G1340genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1254.1e-081461882163
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      R RKk+++ e ++ v +L+ eN+ L+ke++ l+  + +l +e+
  PH01000061G1340 146 RPRKKMRLPEIQQLVRSLTVENDGLRKEMKALQRACTALSKEN 188
                      89*************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-5146185No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MTAADAEAAA DIICSLRAAD LAGWTPPWCR PPPACDGVKE EELAWPAVAR GKRSRSRRRS  60
PSGSGSSATK GRLARGSPAS PLDYSGGSGS GASTSGGEDG AFCSPPAAVH RHAEPTPTPA  120
AATKVGSAGR RPSILPVPPP RPAGQRPRKK MRLPEIQQLV RSLTVENDGL RKEMKALQRA  180
CTALSKENGK LETRLEQSSK RSGIKSEEQQ RKPQLDQRAA EQDAQNGFVL PDLNLPVQDI  240
ADGSAAP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15156KRSRSR
2145151RPRKKMR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000061G1340
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0980020.0FP098002.1 Phyllostachys edulis cDNA clone: bphyem125k10, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015693409.15e-92PREDICTED: uncharacterized protein LOC102714022
TrEMBLJ3MG951e-90J3MG95_ORYBR; Uncharacterized protein
STRINGOB06G30390.12e-91(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37902951