 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PH01000131G1060 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
| Family |
TCP |
| Protein Properties |
Length: 212aa MW: 21787.1 Da PI: 4.6203 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01000131G1060 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 22.3 | 4.1e-07 | 65 | 85 | 5 | 25 |
TCP 5 kdrhskihTkvggRdRRvRls 25
r+ ++hTkv+gR+RR+R+
PH01000131G1060 65 PPRNRDRHTKVEGRGRRIRMA 85
5799****************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MESQLQDRGE EDADADVRYH AAAEDAGNAA LAMATVGPTG AHGSVVPKPE PVPVEFLGGL 60
AVAPPPRNRD RHTKVEGRGR RIRMATAGLA PVSATSAPTG GGIPFIAIPA VGTGAASDGK 120
QMMPPAAVWM VPHAPSAAGA ANQPTHYWAF QTNPELVNFA GAQPINVANI QHQALYNAEH 180
LGSQKVSAVD QPQGEEDEYD GEALTDSSSE A*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator. Binds the promoter core sequence 5'-GGNCC-3', especially at sites IIa (5'-GGGCCCAC-3') and IIb (5'-GGTCCCAC-3') (essential for meristematic tissue-specificity expression) of the PCNA gene promoter. {ECO:0000269|PubMed:12000681}. |
| UniProt | Transcription activator. Binds the promoter core sequence 5'-GGNCC-3', especially at sites IIa (5'-GGGCCCAC-3') and IIb (5'-GGTCCCAC-3') (essential for meristematic tissue-specificity expression) of the PCNA gene promoter. {ECO:0000269|PubMed:12000681, ECO:0000269|PubMed:9338963}. |
