PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000150G0510
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family EIL
Protein Properties Length: 635aa    MW: 70608.1 Da    PI: 6.4494
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000150G0510genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3404.99.9e-124383861316
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel +rmwkd+++lkr+ker+++l   k+a+++++k +k++++a rk ++raQDgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++raW
  PH01000150G0510  38 EELAQRMWKDKIKLKRIKERQEKLA-LKQAELEKSKLKKMSDHALRKRTARAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDNIRAW 130
                      89********************865.77777*************************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wkekv+fd+ngpaai+ky+ +n ++ +++s+   ++ ++hsl++lqD+tlgSLLsalmqhc+p+qr++pl+kgv+pPWWP+G+e+ww +lgl+k
  PH01000150G0510 131 WKEKVKFDKNGPAAIAKYEVENSVMVNAKSS---GTTNQHSLMDLQDATLGSLLSALMQHCSPQQRKYPLDKGVPPPWWPSGNEEWWIALGLPK 221
                      **************************99999...88********************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX....XXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss....slrkqspkvtls 277
                          ppykkphdlkk+wk++vL  vikhm+p++++ir+++r+sk+lq+km+akes ++l vl++ ek ++++    s+    s   ++ + t++
  PH01000150G0510 222 GKA-PPYKKPHDLKKVWKIGVLMGVIKHMAPNFDKIRNHVRKSKCLQHKMTAKESLIWLGVLQRVEKSVHNIANAvSEithhSAPGDRSEDTYD 314
                      998.9******************************************************************99995445543333378889999 PP

                      XXXXXXXXXXXXXX.XXXXXXXXXX.................................XXXXXXXXXXXXXX CS
             EIN3 278 ceqkedvegkkeskikhvqavktta.................................gfpvvrkrkkkpse 316
                      + +++d +  +e+  ++++++++ +                                 + +  rkrk+++++
  PH01000150G0510 315 SIDEYDADRLEEPPHSTSSKDDEGThqpavqirenhaisrgnrrrhdkhsnqvlpsneENNEPRKRKRRTRH 386
                      9999****7777777877777777745555555566666666666666666655555433333333333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.8E-12338284No hitNo description
Gene3DG3DSA:1.10.3180.106.8E-67160293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.96E-58166286IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 635 aa     Download sequence    Send to blast
MDHFAILATE LGDASDFEVD GIQNLTENDV SDEEIEAEEL AQRMWKDKIK LKRIKERQEK  60
LALKQAELEK SKLKKMSDHA LRKRTARAQD GILKYMLKLM EVCNARGFVY GIIPDKGKPV  120
SGASDNIRAW WKEKVKFDKN GPAAIAKYEV ENSVMVNAKS SGTTNQHSLM DLQDATLGSL  180
LSALMQHCSP QQRKYPLDKG VPPPWWPSGN EEWWIALGLP KGKAPPYKKP HDLKKVWKIG  240
VLMGVIKHMA PNFDKIRNHV RKSKCLQHKM TAKESLIWLG VLQRVEKSVH NIANAVSEIT  300
HHSAPGDRSE DTYDSIDEYD ADRLEEPPHS TSSKDDEGTH QPAVQIRENH AISRGNRRRH  360
DKHSNQVLPS NEENNEPRKR KRRTRHSSVA EYEVEVTQRN DKYEVEVTQI NDNPPEILRN  420
VIADMNRINL VETTGMANHL TSLNHVSTSV ALQLQGAAQG DFLSPGAVVN NYNCNQATNV  480
NPSSSSIYMG DQPLACESSD HTNACHTNAW SGNTFQQDLG LGPIAFSSSL LDYNTSAVKQ  540
SLPLSMDHHV PTMGTGALAE NSSYSHHMSG SGNSTSVAGA VHQIMGDPFY NDPSDKFVGS  600
SFEGLPLDFI GISSPIPDID DLLDDDDLMQ YLGT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-591662919134ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1377382RKRKRR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000150G0510
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010235295.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_014757042.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_024316421.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-134EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLI1I8G10.0I1I8G1_BRADI; Uncharacterized protein
STRINGBRADI3G39970.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-136ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]