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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PH01000170G1390 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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| Family |
GRAS |
| Protein Properties |
Length: 403aa MW: 43137.8 Da PI: 6.8446 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01000170G1390 | genome | ICBR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 291 | 3.1e-89 | 46 | 401 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
L e+A+ ++gd a+++Larl+ + a +g+p+ R a+yf+eAL+ l+ + +a +ps +++++++ +l a+k+fsevsP+l+f+
PH01000170G1390 46 SLAEAAKLAEAGDSFGAREILARLNYRlpaAPTAGTPLLRSAFYFKEALRLALSP----TGEAPAPSVSTPYDVVLKLRAYKAFSEVSPVLQFA 135
6999**********************999555566******************99....888999999999*********************** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
hlt+ qa+l+++ g +++H+ Dfdi++G QW++L+q+La+R +++ l++T+++sp+s+++ el+ ++e+L++fA+elgv f+f v+ ++++
PH01000170G1390 136 HLTTVQAVLDELGGTSCIHVFDFDIGMGEQWASLMQELAQR-RPATVLKVTALVSPASHHQLELQLIHENLSSFADELGVLFQFAVF---NIDN 225
****************************************9.7889****************************************9...7888 PP
GRAS 189 leleeL.rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
l++ eL ++ g+++aV+l + ++ + +++L+lvk+l +kvv+ v++ +d+++ +F++++++a+ + l++sl+a +++++
PH01000170G1390 226 LDPAELlAIAGGDVVAVHLPVGSAHVA--------AMPAILRLVKRLGAKVVISVDRGCDRTELPFAAHLFQAFLSCLFLLESLDAV-CTDADT 310
88776637777***********99998........4566*********************************************998.58999* PP
GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
+ k+Er+l++++++++v ++++ + ++ Wr + +aGF pv+ s++a++qa++ll+kv+ +g+rve++ gsl+l+W++ +LvsvSaWr
PH01000170G1390 311 AGKIERFLVQPAVEQCVLGRHRA---AMDKAPPWRTVFASAGFVPVQASTFAESQAESLLKKVPARGFRVEKRaPGSLCLYWQRGELVSVSAWR 401
******************99888...9999*****************************************88478999**************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 403 aa
Download sequence Send
to blast |
MPFAGSAREG HAGTLLLQQQ QQQGLTLPGL AAGKVSGAGS FWEPTSLAEA AKLAEAGDSF 60 GAREILARLN YRLPAAPTAG TPLLRSAFYF KEALRLALSP TGEAPAPSVS TPYDVVLKLR 120 AYKAFSEVSP VLQFAHLTTV QAVLDELGGT SCIHVFDFDI GMGEQWASLM QELAQRRPAT 180 VLKVTALVSP ASHHQLELQL IHENLSSFAD ELGVLFQFAV FNIDNLDPAE LLAIAGGDVV 240 AVHLPVGSAH VAAMPAILRL VKRLGAKVVI SVDRGCDRTE LPFAAHLFQA FLSCLFLLES 300 LDAVCTDADT AGKIERFLVQ PAVEQCVLGR HRAAMDKAPP WRTVFASAGF VPVQASTFAE 360 SQAESLLKKV PARGFRVEKR APGSLCLYWQ RGELVSVSAW RC*
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