PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000315G0720
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 386aa    MW: 42391.1 Da    PI: 9.1089
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000315G0720genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.45.4e-072582941753
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                      A+rsR RK+++i+eLe+kv++L++e  +   e+e l+
  PH01000315G0720 258 AQRSRVRKLQYIAELERKVQALQSEGIEVSAEMEFLT 294
                      89**********************9777666666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.5E-6247306IPR004827Basic-leucine zipper domain
CDDcd147031.78E-15248298No hitNo description
SuperFamilySSF579593.44E-6257300No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-8258300No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MGADDSRGRL AELGEEDGGV RRSLVERMLM ANARLQKQAL LPPRSPFPTA ASPSPYADHG  60
PIARPQGATY YRHGHGHVHG HGHHQRTSSE SFIEEQPSWL DDLLNEPETP VRQHGRAGHR  120
RSSSDSFALF DGGAAAGAYA NGFEGMGGGG QVAPWGGVQE YYAKPGSFGR PQGRPWEQGM  180
PNSVGYRQGG GPPMPVKEKI GGHHGPPSAL RDLEHGMDKR APDEAGHDQK VGAEMKEGVP  240
PKHAQSEADT KRAKQQYAQR SRVRKLQYIA ELERKVQALQ SEGIEVSAEM EFLTQQNIML  300
DLENKALKQR LESLSQEQLI KHFQQEMFER EISRLRSLYQ QQQSSQPSAP GRSNSRDLDS  360
QFANLSLKHK DPNSGRGAVS GPLRT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000315G0720
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0937310.0FP093731.1 Phyllostachys edulis cDNA clone: bphylf027l08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006662832.20.0PREDICTED: uncharacterized protein At4g06598-like
TrEMBLA0A0A9E2N80.0A0A0A9E2N8_ARUDO; Uncharacterized protein
STRINGOB11G15450.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.27e-55bZIP family protein