PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000430G0960
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family EIL
Protein Properties Length: 346aa    MW: 38399.6 Da    PI: 4.4064
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000430G0960genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN399.76.2e-311169217354
                      TGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXX...XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.... CS
             EIN3 217 msptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrk...qspkvtlsceqkedvegkkeskikhvqavktta.... 302
                      msp+ie+ir+l+rqsk+lqdkm+ake +++l+v++qee+++ ++++  + s ++    s      +++++dv++ ++ k  +v ++kt++    
  PH01000430G0960   1 MSPDIEKIRRLVRQSKCLQDKMTAKEIATWLAVVKQEEELYLKLHPGARpSASSggiASAISSNASSSEYDVDVVDDCKGDEVGNQKTAMvdps 94 
                      89********************************************9443333322333333334567999**999999899999999889*** PP

                      ........................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS
             EIN3 303 ........................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354
                                              ++++++kr +  +e++ + +++v +tc++ q+++s++  +f d+n++++++y
  PH01000430G0960  95 afnlgaaiqndmflmptpmkeetaDVEFIQKRSAAAAEPELMLNNRV-YTCNNVQCPHSDYGYGFLDRNARNSHQY 169
                      *******************************************9986.**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.103.1E-16146IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-11141IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048733.9E-10138No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MSPDIEKIRR LVRQSKCLQD KMTAKEIATW LAVVKQEEEL YLKLHPGARP SASSGGIASA  60
ISSNASSSEY DVDVVDDCKG DEVGNQKTAM VDPSAFNLGA AIQNDMFLMP TPMKEETADV  120
EFIQKRSAAA AEPELMLNNR VYTCNNVQCP HSDYGYGFLD RNARNSHQYT CKYNDPFPPS  180
AENKPPQPPP EVFPATYNPP NQTLNNLDFS LPMDGQRSIA ELMNMYDNNF MANKNLSNDN  240
VTIMERPNAL TPRLQMDDSF FAQGNGIGGN GGGVFDDVNN MMQQQQQQQR QQAPVQQQFF  300
TRDETPFGNQ MGDITGASEF RFGSGFNMSG AVDYPQKNDG PSWFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-1414687132Protein ETHYLENE INSENSITIVE 3
4zds_B1e-1414687132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000430G0960
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0954630.0FP095463.1 Phyllostachys edulis cDNA clone: bphylf050m22, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006650014.10.0PREDICTED: LOW QUALITY PROTEIN: ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ10M410.0EIL1A_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1a
TrEMBLA0A0D9VTH70.0A0A0D9VTH7_9ORYZ; Uncharacterized protein
STRINGLPERR03G13760.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-34EIL family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]
  3. Yang C, et al.
    Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
    Plant J., 2017. 89(2): p. 338-353
    [PMID:27701783]
  4. Qin H, et al.
    The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
    PLoS Genet., 2017. 13(8): p. e1006955
    [PMID:28829777]
  5. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]