PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000530G0220
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family EIL
Protein Properties Length: 628aa    MW: 69302.7 Da    PI: 5.4092
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000530G0220genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3437.41.3e-133754362353
                      XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                      el++rmw+d+m+lkrlk+++  + +++  ++  +++++s+eqarrkkms aQDgiLkYMlk+mevcnaqGfvYgiipe+gkpv gasd+Lr+WW
  PH01000530G0220  75 ELERRMWRDRMRLKRLKDKQHTSRGKEPGDATRQQHRQSQEQARRKKMSCAQDGILKYMLKMMEVCNAQGFVYGIIPENGKPVGGASDNLRSWW 168
                      9********************998777777999999********************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT CS
             EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskd 189
                      k+kv+fdrngpaai+kyqa+n++++++ + +  ++++ hsl elqDTtlgSLLsalmqhcdppqrrfplekgv+pP        ww+elg+ kd
  PH01000530G0220 169 KDKVRFDRNGPAAIAKYQAENAVPGSGGEVKN-ATASLHSLLELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPP--------WWSELGTLKD 253
                      *************************9999865.9******************************************........889999**** PP

                      --.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX..........XXXXX CS
             EIN3 190 qgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss..........slrkq 270
                      qg+ppykkphdlkkawkv vLt+vikhm p++e+ir+l+rqsk+lqdkm+akes+++lsvl++ e+ +++++++   ++               
  PH01000530G0220 254 QGPPPYKKPHDLKKAWKVCVLTSVIKHMCPDVERIRRLVRQSKCLQDKMTAKESATWLSVLKRVEETYTKLHPDvciPQypesgmfhglA---- 343
                      **************************************************************************8763354333222220.... PP

                      XXXXXXXXXXXXXXX...XXXXXX.XXXXXXXXXX................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXX CS
             EIN3 271 spkvtlsceqkedve...gkkeskikhvqavktta................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifad 345
                         +  s++++ +ve   g+k+++ ++v  +k                   +++++ kr   +s+   v ++  ++tcq+ ++++s+++++f d
  PH01000530G0220 344 ---F-NSSSTEHNVEgflGNKKNE-EDVMLHKSVPaatnrfaapapvkeeaNVELTFKRS--SSDTGPVPQR--VYTCQNTECPQSDVSHGFLD 428
                      ...2.2233334444666333333.22322222224556777878887766788888876..6777777555..7******************* PP

                      XXXXXXXX CS
             EIN3 346 knsisqne 353
                      + ++++++
  PH01000530G0220 429 RDARNNHQ 436
                      ******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.7E-11774316No hitNo description
Gene3DG3DSA:1.10.3180.105.9E-59201328IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.03E-49205321IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    Send to blast
MGALLLDSIF YPDPGSAGSG PNDFAPFVPC PDDDRIDPTL ASFCQPPLFD PTAGDNHVDA  60
ASDGEDSDEE LDVQELERRM WRDRMRLKRL KDKQHTSRGK EPGDATRQQH RQSQEQARRK  120
KMSCAQDGIL KYMLKMMEVC NAQGFVYGII PENGKPVGGA SDNLRSWWKD KVRFDRNGPA  180
AIAKYQAENA VPGSGGEVKN ATASLHSLLE LQDTTLGSLL SALMQHCDPP QRRFPLEKGV  240
APPWWSELGT LKDQGPPPYK KPHDLKKAWK VCVLTSVIKH MCPDVERIRR LVRQSKCLQD  300
KMTAKESATW LSVLKRVEET YTKLHPDVCI PQYPESGMFH GLAFNSSSTE HNVEGFLGNK  360
KNEEDVMLHK SVPAATNRFA APAPVKEEAN VELTFKRSSS DTGPVPQRVY TCQNTECPQS  420
DVSHGFLDRD ARNNHQFICK APQDLSTPST IGVQMLENKP AVVSSPFSIP AGQNATGFGQ  480
SLPGSSCANP ISIADFGLPT DGVKSIGELM NLYDSVVSSS KSFDSSAVTS FYEPSCLRPT  540
TEGDLFGQDD DLDPSIFEEV SDLMQLPPQF FMSENAMQAQ QPFVYQDSDA SVTNLKLGSG  600
ANYVSIDYLG ASQRQQSENH SRPNWLY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-582063274133Protein ETHYLENE INSENSITIVE 3
4zds_B2e-582063274133Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000530G0220
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020086293.10.0ETHYLENE INSENSITIVE 3-like 1 protein
RefseqXP_020086294.10.0ETHYLENE INSENSITIVE 3-like 1 protein
RefseqXP_020086296.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ10M411e-178EIL1A_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1a
TrEMBLA0A2H3XY140.0A0A2H3XY14_PHODC; ETHYLENE INSENSITIVE 3-like 1 protein
STRINGXP_008790465.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-142EIL family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]
  3. Yang C, et al.
    Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
    Plant J., 2017. 89(2): p. 338-353
    [PMID:27701783]
  4. Qin H, et al.
    The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
    PLoS Genet., 2017. 13(8): p. e1006955
    [PMID:28829777]
  5. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]